STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXB59359.1Glycerate kinase; KEGG: sak:SAK_0918 1.1e-69 glycerate kinase K00865; Psort location: Cytoplasmic, score: 7.50; Belongs to the glycerate kinase type-1 family. (382 aa)    
Predicted Functional Partners:
tadA
Cytidine and deoxycytidylate deaminase zinc-binding region; Catalyzes the deamination of adenosine to inosine at the wobble position 34 of tRNA(Arg2); Belongs to the cytidine and deoxycytidylate deaminase family.
 
    0.904
KXB59360.1
Putative membrane protein; KEGG: apb:SAR116_2040 8.9e-18 integral membrane protein K15270; Psort location: CytoplasmicMembrane, score: 10.00.
       0.774
KXB59361.1
Hypothetical protein.
       0.746
MutX
Mutator MutT protein; KEGG: ssv:SSU98_1161 7.4e-46 NTP pyrophosphohydrolase including oxidative damage repair enzymes; K03574 7,8-dihydro-8-oxoguanine triphosphatase.
 
    0.688
murD
UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase; Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA). Belongs to the MurCDEF family.
     0.665
YabJ
KEGG: mpf:MPUT_0133 8.7e-27 endoribonuclease L-PSP K07567; Psort location: Cytoplasmic, score: 9.97.
 
    0.634
IdnT
Transporter, gluconate:H+ symporter family; KEGG: ebe:B21_04152 1.2e-61 gntP; GntP Gluconate Gnt transporter K03299; Psort location: CytoplasmicMembrane, score: 10.00.
 
  
 0.584
pyrC
Dihydroorotase; Catalyzes the reversible cyclization of carbamoyl aspartate to dihydroorotate; Belongs to the metallo-dependent hydrolases superfamily. DHOase family. Class I DHOase subfamily.
 
  
 0.566
YurY
FeS assembly ATPase SufC; KEGG: bya:BANAU_3169 3.4e-96 sufC; phosphate import ATP-binding protein pstB K09013; Psort location: Cytoplasmic, score: 9.97.
       0.433
Csd
Cysteine desulfurase, SufS subfamily; Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L-selenocystine to produce L-alanine.
       0.433
Your Current Organism:
Gemella haemolysans
NCBI taxonomy Id: 1379
Other names: ATCC 10379, CCUG 37985, CIP 101126, G. haemolysans, LMG 18984, LMG:18984, NCTC 12968, Neisseria haemolysans
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