STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NifUSUF system FeS assembly protein, NifU family; KEGG: pfe:PSF113_1013 5.6e-09 iscU; protein IscU K04488; Psort location: Cytoplasmic, score: 7.50. (142 aa)    
Predicted Functional Partners:
Csd
Cysteine desulfurase, SufS subfamily; Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L-selenocystine to produce L-alanine.
 
 
 0.981
KXB59363.1
KEGG: suc:ECTR2_773 1.8e-28 sufB; feS assembly protein SufB K09014; Psort location: Cytoplasmic, score: 7.50.
 
  
 0.978
YurY
FeS assembly ATPase SufC; KEGG: bya:BANAU_3169 3.4e-96 sufC; phosphate import ATP-binding protein pstB K09013; Psort location: Cytoplasmic, score: 9.97.
  
  
 0.974
KXB59366.1
KEGG: suc:ECTR2_773 1.5e-189 sufB; feS assembly protein SufB K09014.
  
  
 0.962
IscS_2
KEGG: sdt:SPSE_1083 2.3e-90 class V aminotransferase; K04487 cysteine desulfurase; Psort location: Cytoplasmic, score: 9.97.
 
 0.934
NifS
KEGG: apr:Apre_0565 2.5e-68 class V aminotransferase; K04487 cysteine desulfurase; Psort location: Cytoplasmic, score: 9.97.
 
 0.928
IscS_1
KEGG: cpy:Cphy_1489 1.3e-96 cysteine desulfurase; Psort location: Cytoplasmic, score: 9.97.
 
 
 0.881
dnaK
Chaperone protein DnaK; Acts as a chaperone; Belongs to the heat shock protein 70 family.
  
 
 0.843
KXB63615.1
HesB-like protein; KEGG: rno:290985 5.0e-08 Isca1, Hbld2, hIscA; iron-sulfur cluster assembly 1 homolog (S. cerevisiae) K13628; Psort location: Cytoplasmic, score: 7.50; Belongs to the HesB/IscA family.
  
  
 0.820
NfuA
NifU-like protein; KEGG: apb:SAR116_1595 7.1e-09 nitrogen-fixing NifU domain-containing protein; Psort location: Cytoplasmic, score: 7.50.
  
 
 0.706
Your Current Organism:
Gemella haemolysans
NCBI taxonomy Id: 1379
Other names: ATCC 10379, CCUG 37985, CIP 101126, G. haemolysans, LMG 18984, LMG:18984, NCTC 12968, Neisseria haemolysans
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