STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXB59397.1Hypothetical protein; KEGG: snc:HMPREF0837_11663 1.1e-42 phosphopentomutase; Psort location: Cytoplasmic, score: 7.50. (178 aa)    
Predicted Functional Partners:
KXB58362.1
Hypothetical protein; KEGG: snc:HMPREF0837_11663 7.6e-05 phosphopentomutase; Psort location: Cytoplasmic, score: 7.50.
  
     0.774
IdnT
Transporter, gluconate:H+ symporter family; KEGG: ebe:B21_04152 1.2e-61 gntP; GntP Gluconate Gnt transporter K03299; Psort location: CytoplasmicMembrane, score: 10.00.
       0.606
KXB57893.1
CsbD-like protein; KEGG: ssr:SALIVB_0754 1.6e-11 putative manganese-dependent inorganic pyrophosphatase; Belongs to the UPF0337 (CsbD) family.
 
     0.580
efp
Translation elongation factor P; Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase.
       0.571
rpmB
Ribosomal protein L28; KEGG: apb:SAR116_1905 0.00042 50S ribosomal protein L28 K02902; Psort location: Cytoplasmic, score: 9.67; Belongs to the bacterial ribosomal protein bL28 family.
       0.407
KXB59684.1
Signal peptide protein, YSIRK family; KEGG: gtn:GTNG_2102 1.6e-09 penicillin-binding proteins 1A and 1B; K05366 penicillin-binding protein 1A.
  
     0.406
Your Current Organism:
Gemella haemolysans
NCBI taxonomy Id: 1379
Other names: ATCC 10379, CCUG 37985, CIP 101126, G. haemolysans, LMG 18984, LMG:18984, NCTC 12968, Neisseria haemolysans
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.