STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXB59277.1Hypothetical protein; KEGG: ssk:SSUD12_1198 1.4e-19 DNA methylase; K13581 modification methylase. (84 aa)    
Predicted Functional Partners:
DpnA_2
KEGG: ssk:SSUD12_1198 1.7e-55 DNA methylase; K13581 modification methylase; Psort location: Cytoplasmic, score: 7.50; Belongs to the N(4)/N(6)-methyltransferase family.
 
  
 0.972
HaeIIIM
Modification methylase HaeIII domain protein; KEGG: gva:HMPREF0424_0535 2.6e-43 dcm_2; DNA (cytosine-5-)-methyltransferase K00558.
  
  
 0.786
KXB59276.1
Hypothetical protein; Psort location: Cytoplasmic, score: 7.50.
       0.774
Soj
KEGG: ccm:Ccan_17350 2.6e-73 Sporulation initiation inhibitor protein soj K03496; Psort location: CytoplasmicMembrane, score: 8.78.
  
 
 0.676
rsmG
16S rRNA methyltransferase GidB; Specifically methylates the N7 position of guanine in position 535 of 16S rRNA; Belongs to the methyltransferase superfamily. RNA methyltransferase RsmG family.
  
  
 0.508
KXB60988.1
KEGG: daf:Desaf_2963 0.0017 phosphoadenosine phosphosulfate reductase; K00390 phosphoadenosine phosphosulfate reductase.
  
 
 0.443
polA
DNA-directed DNA polymerase; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity.
  
  
 0.412
Your Current Organism:
Gemella haemolysans
NCBI taxonomy Id: 1379
Other names: ATCC 10379, CCUG 37985, CIP 101126, G. haemolysans, LMG 18984, LMG:18984, NCTC 12968, Neisseria haemolysans
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.