STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
YwpJ_1Cof-like hydrolase; KEGG: yph:YPC_4614 5.7e-23 yidA; multifunctional Erythrose 4-P, mannose 1-P, and alpha-D-glucose-1-P phosphatase K07024; Psort location: Cytoplasmic, score: 7.50. (277 aa)    
Predicted Functional Partners:
KXB59262.1
Putative cell wall teichoic acid glycosylation protein GtcA; KEGG: kcr:Kcr_0200 1.5e-07 glycosyl transferase family protein; K00721 dolichol-phosphate mannosyltransferase; Psort location: CytoplasmicMembrane, score: 10.00.
       0.776
KXB57130.1
HAD hydrolase, family IIB; KEGG: sgg:SGGBAA2069_c01270 1.1e-12 HMP-PP phosphatase K07024; Psort location: Cytoplasmic, score: 7.50.
  
     0.546
secD
Export membrane protein SecD; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA; Belongs to the SecD/SecF family. SecD subfamily.
  
    0.522
KXB59260.1
Hypothetical protein; Psort location: Cytoplasmic, score: 7.50.
       0.423
KXB59261.1
Hypothetical protein; KEGG: phu:Phum_PHUM421050 0.0012 Soluble calcium-activated nucleotidase, putative K12304.
       0.423
Your Current Organism:
Gemella haemolysans
NCBI taxonomy Id: 1379
Other names: ATCC 10379, CCUG 37985, CIP 101126, G. haemolysans, LMG 18984, LMG:18984, NCTC 12968, Neisseria haemolysans
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.