STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXB59266.1Signal peptide protein, YSIRK family; KEGG: isc:IscW_ISCW000348 2.1e-16 secreted mucin MUC17, putative; Psort location: Cellwall, score: 9.39. (2536 aa)    
Predicted Functional Partners:
KXB57679.1
G5 domain protein; KEGG: sgo:SGO_0942 0. zmpC; zinc metalloproteinase C; Psort location: Cellwall, score: 9.20.
 
  
 0.626
KXB58189.1
G5 domain protein; KEGG: sgo:SGO_0942 0. zmpC; zinc metalloproteinase C; Psort location: Cellwall, score: 9.20.
 
  
 0.611
KXB57462.1
Hypothetical protein; KEGG: snv:SPNINV200_10720 0. zmpA; IgA-protease; Psort location: Cellwall, score: 9.20.
 
  
 0.609
scpA
ScpA/B protein; Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves.
  
 
 0.582
KXB61572.1
M26 IgA1-specific Metallo-endopeptidase region; KEGG: snp:SPAP_0653 0. hypothetical protein; K08643 zinc metalloprotease ZmpB; Psort location: Cellwall, score: 9.20.
 
    0.523
secD
Export membrane protein SecD; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA; Belongs to the SecD/SecF family. SecD subfamily.
  
    0.520
KXB62457.1
Transporter, major facilitator family protein; Psort location: CytoplasmicMembrane, score: 10.00.
  
     0.519
KXB61087.1
G5 domain protein; KEGG: smb:smi_1482 0. zmpB; zinc metalloprotease; K08643 zinc metalloprotease ZmpB.
  
     0.519
polA
DNA-directed DNA polymerase; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity.
  
 
 0.513
gyrB
DNA gyrase, B subunit; A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner.
   
 
 0.463
Your Current Organism:
Gemella haemolysans
NCBI taxonomy Id: 1379
Other names: ATCC 10379, CCUG 37985, CIP 101126, G. haemolysans, LMG 18984, LMG:18984, NCTC 12968, Neisseria haemolysans
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