STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXB59055.1Hypothetical protein; KEGG: cth:Cthe_1169 8.4e-16 beta-lactamase class A-like protein; K01467 beta-lactamase. (316 aa)    
Predicted Functional Partners:
KXB57598.1
Mur ligase middle domain protein; KEGG: sab:SAB1824c 1.9e-111 UDP-N-acetylmuramyl tripeptide synthase; Psort location: Cytoplasmic, score: 7.50.
 
     0.484
KXB57599.1
CobB/CobQ-like protein; KEGG: sax:USA300HOU_1889 2.0e-75 adenosylcobyric acid synthase (glutamine-hydrolyzing) K07009.
 
     0.464
KXB59056.1
Acetyltransferase, GNAT family; KEGG: suy:SA2981_2219 1.3e-14 Acetyltransferase; Psort location: Cytoplasmic, score: 7.50.
       0.449
KXB59054.1
KEGG: sah:SaurJH1_2156 5.1e-141 DEAD/DEAH box helicase; K05592 ATP-dependent RNA helicase DeaD; Psort location: Cytoplasmic, score: 9.95.
       0.429
PbpX
KEGG: mcl:MCCL_0753 1.1e-154 pbpA; penicillin-binding protein 1; K12552 penicillin-binding protein 1; Psort location: CytoplasmicMembrane, score: 9.51.
  
  
 0.427
KXB63363.1
Cell wall-binding repeat protein; KEGG: smb:smi_1563 7.5e-21 lytC; choline-binding protein LytC, 4-beta-N-acetylmuramidase, Cpb13; Psort location: Extracellular, score: 8.91.
  
     0.402
Your Current Organism:
Gemella haemolysans
NCBI taxonomy Id: 1379
Other names: ATCC 10379, CCUG 37985, CIP 101126, G. haemolysans, LMG 18984, LMG:18984, NCTC 12968, Neisseria haemolysans
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.