STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HepTKEGG: hhd:HBHAL_3282 4.6e-53 hepT; heptaprenyl diphosphate synthase component II K00805; Psort location: Cytoplasmic, score: 9.67; Belongs to the FPP/GGPP synthase family. (323 aa)    
Predicted Functional Partners:
UppS
Di-trans,poly-cis-decaprenylcistransferase; Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids.
 
 
 0.965
KXB59358.1
Putative geranyltranstransferase; KEGG: fnu:FN1327 4.7e-51 dimethylallyltransferase K13789; Psort location: Cytoplasmic, score: 9.97; Belongs to the FPP/GGPP synthase family.
  
  
 
0.927
KXB59057.1
Hypothetical protein; KEGG: bya:BANAU_2226 5.8e-08 ypiA; UDP-N-acetylglucosamine-peptide N-acetylglucosaminyltransferase 110 kDa subunit; Psort location: Cytoplasmic, score: 7.50.
       0.773
KXB59059.1
Hypothetical protein.
       0.773
KXB59056.1
Acetyltransferase, GNAT family; KEGG: suy:SA2981_2219 1.3e-14 Acetyltransferase; Psort location: Cytoplasmic, score: 7.50.
       0.652
polA
DNA-directed DNA polymerase; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity.
     
 0.512
rnj
Ribonuclease J 1; An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and/or decay; Belongs to the metallo-beta-lactamase superfamily. RNA- metabolizing metallo-beta-lactamase-like family. Bacterial RNase J subfamily.
  
    0.493
rnj-2
Hypothetical protein; An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and/or decay.
  
    0.493
tatC
Twin arginine-targeting protein translocase TatC; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes.
 
  
 0.491
KXB63616.1
Pyridine nucleotide-disulfide oxidoreductase; KEGG: suh:SAMSHR1132_07930 3.4e-96 NADH dehydrogenase-like protein K03885; Psort location: CytoplasmicMembrane, score: 8.78.
 
  
 0.485
Your Current Organism:
Gemella haemolysans
NCBI taxonomy Id: 1379
Other names: ATCC 10379, CCUG 37985, CIP 101126, G. haemolysans, LMG 18984, LMG:18984, NCTC 12968, Neisseria haemolysans
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