STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXB58927.1Hypothetical protein; Psort location: Cytoplasmic, score: 7.50. (200 aa)    
Predicted Functional Partners:
LolD_1
KEGG: scp:HMPREF0833_10812 1.2e-75 ABC transporter ATP-binding protein K02003; Psort location: CytoplasmicMembrane, score: 8.78.
   
 
 0.808
KXB58925.1
Efflux ABC transporter, permease protein; KEGG: sgg:SGGBAA2069_c11620 2.2e-06 putative ABC transporter permease K02004; Psort location: CytoplasmicMembrane, score: 10.00.
  
  
 0.789
KXB58928.1
C4-dicarboxylate transporter/malic acid transport protein; Psort location: CytoplasmicMembrane, score: 10.00.
       0.544
pth
aminoacyl-tRNA hydrolase; The natural substrate for this enzyme may be peptidyl-tRNAs which drop off the ribosome during protein synthesis. Belongs to the PTH family.
  
    0.467
KXB58495.1
KEGG: efc:EFAU004_00424 9.2e-158 ABC transporter ATP-binding protein/permease; Psort location: CytoplasmicMembrane, score: 10.00.
 
 
 0.400
Your Current Organism:
Gemella haemolysans
NCBI taxonomy Id: 1379
Other names: ATCC 10379, CCUG 37985, CIP 101126, G. haemolysans, LMG 18984, LMG:18984, NCTC 12968, Neisseria haemolysans
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