STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXB58767.1ABC-2 type transporter; Psort location: CytoplasmicMembrane, score: 10.00. (262 aa)    
Predicted Functional Partners:
KXB58768.1
ABC transporter, ATP-binding protein; KEGG: ppo:PPM_0762 6.8e-59 drrA1; spermidine/putrescine import ATP-binding protein potA; Psort location: CytoplasmicMembrane, score: 9.51.
 
     0.949
KXB58766.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 10.00.
 
     0.947
KXB60323.1
KEGG: apv:Apar_0931 2.3e-49 Acetyl xylan esterase; K01060 cephalosporin-C deacetylase.
  
     0.552
KXB62264.1
Acetyltransferase, GNAT family; KEGG: fnu:FN0657 9.2e-32 acetyltransferase.
  
     0.509
KXB58765.1
Hypothetical protein; KEGG: zin:ZICARI_096 1.9e-08 nuoN; putative NADH:ubiquinone oxidoreductase I, membrane subunit N; K00343 NADH-quinone oxidoreductase subunit N; Psort location: CytoplasmicMembrane, score: 10.00.
       0.480
KXB58769.1
Abi-like protein; Psort location: Cytoplasmic, score: 7.50.
       0.402
Your Current Organism:
Gemella haemolysans
NCBI taxonomy Id: 1379
Other names: ATCC 10379, CCUG 37985, CIP 101126, G. haemolysans, LMG 18984, LMG:18984, NCTC 12968, Neisseria haemolysans
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