STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OutOBacterial peptidase A24 protein; KEGG: sca:Sca_1265 1.8e-28 hypothetical protein; K02236 leader peptidase (prepilin peptidase) / N-methyltransferase; Psort location: CytoplasmicMembrane, score: 10.00. (239 aa)    
Predicted Functional Partners:
KXB58264.1
ComG operon protein 1 family protein; KEGG: cco:CCC13826_1231 1.2e-45 L(+)-tartrate dehydratase subunit beta (L-TTD beta) K02454; Psort location: Cytoplasmic, score: 9.89.
 
 
 0.907
KXB58265.1
Bacterial type II secretion system protein F domain protein; KEGG: pfe:PSF113_5005 1.5e-11 pilC; protein PilC K02653; Psort location: CytoplasmicMembrane, score: 10.00.
 
  
 0.895
KXB58779.1
KEGG: apb:SAR116_0666 2.1e-18 DNA repair protein RadC K03630; Psort location: Cytoplasmic, score: 7.50; Belongs to the UPF0758 family.
     
 0.814
KXB57223.1
DNA protecting protein DprA; KEGG: ccm:Ccan_01460 5.8e-30 protein smf K04096; Psort location: Cytoplasmic, score: 7.50.
 
  
 0.740
KXB63640.1
comEA protein; KEGG: has:Halsa_0780 4.0e-11 glycogen/starch synthase K00703; Psort location: CytoplasmicMembrane, score: 10.00.
 
  
 0.694
KXB58266.1
Putative ComG operon protein 3; Required for transformation and DNA binding.
 
  
 0.647
secD
Export membrane protein SecD; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA; Belongs to the SecD/SecF family. SecD subfamily.
     
 0.553
KXB58268.1
Prepilin-type cleavage/methylation protein.
  
  
 0.545
cinA
Competence/damage-inducible protein CinA domain protein; KEGG: cco:CCC13826_0279 4.5e-15 fadD; long-chain-fatty-acid--CoA ligase K03743; Psort location: CytoplasmicMembrane, score: 8.16; Belongs to the CinA family.
     
 0.497
SpsB
KEGG: suz:MS7_0920 2.1e-41 signal peptidase I K03100; Psort location: Cellwall, score: 8.75; Belongs to the peptidase S26 family.
 
   
 0.486
Your Current Organism:
Gemella haemolysans
NCBI taxonomy Id: 1379
Other names: ATCC 10379, CCUG 37985, CIP 101126, G. haemolysans, LMG 18984, LMG:18984, NCTC 12968, Neisseria haemolysans
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.