STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXB58355.1KEGG: ooe:OEOE_0791 1.6e-27 thiamine pyrophosphokinase; K00949 thiamine pyrophosphokinase; Psort location: Cytoplasmic, score: 7.50. (210 aa)    
Predicted Functional Partners:
rsgA
Ribosome small subunit-dependent GTPase A; One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Helps release RbfA from mature subunits. May play a role in the assembly of ribosomal proteins into the subunit. Circularly permuted GTPase that catalyzes slow GTP hydrolysis, GTPase activity is stimulated by the 30S ribosomal subunit; Belongs to the TRAFAC class YlqF/YawG GTPase family. RsgA subfamily.
  
  
 0.821
Rpe
KEGG: esi:Exig_1921 7.4e-62 ribulose-phosphate 3-epimerase K01783; Psort location: Cytoplasmic, score: 7.50.
  
  
 0.806
KXB58356.1
Hypothetical protein; KEGG: apb:SAR116_2179 4.2e-10 permease K07090; Psort location: CytoplasmicMembrane, score: 10.00.
       0.757
KXB58357.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 10.00.
       0.752
RecN
DNA repair protein RecN; May be involved in recombinational repair of damaged DNA.
       0.678
TlyA
Ribosomal RNA large subunit methyltransferase J; KEGG: lin:lin1403 1.6e-80 hypothetical protein; K06442 23S rRNA (cytidine1920-2'-O)/16S rRNA (cytidine1409-2'-O)-methyltransferase; Psort location: Cytoplasmic, score: 7.50.
       0.660
CydB
KEGG: btc:CT43_CH1891 3.7e-99 cydB1; cytochrome d ubiquinol oxidase subunit II; K00426 cytochrome d ubiquinol oxidase subunit II; Psort location: CytoplasmicMembrane, score: 10.00.
 
     0.499
AppC
KEGG: lsg:lse_2631 1.5e-127 cydA; cytochrome d ubiquinol oxidase, subunit I; K00425 cytochrome d ubiquinol oxidase subunit I; Psort location: CytoplasmicMembrane, score: 10.00.
 
     0.495
RsmB
Ribosomal RNA small subunit methyltransferase B; Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA.
 
   
 0.448
recX
Regulatory protein RecX; Modulates RecA activity; Belongs to the RecX family.
  
   0.428
Your Current Organism:
Gemella haemolysans
NCBI taxonomy Id: 1379
Other names: ATCC 10379, CCUG 37985, CIP 101126, G. haemolysans, LMG 18984, LMG:18984, NCTC 12968, Neisseria haemolysans
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