STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXB58362.1Hypothetical protein; KEGG: snc:HMPREF0837_11663 7.6e-05 phosphopentomutase; Psort location: Cytoplasmic, score: 7.50. (177 aa)    
Predicted Functional Partners:
KXB59397.1
Hypothetical protein; KEGG: snc:HMPREF0837_11663 1.1e-42 phosphopentomutase; Psort location: Cytoplasmic, score: 7.50.
  
     0.774
KXB62147.1
KEGG: ase:ACPL_3798 2.3e-26 Abhydrolase domain-containing protein 11; Psort location: Cytoplasmic, score: 7.50.
 
     0.511
AppC
KEGG: lsg:lse_2631 1.5e-127 cydA; cytochrome d ubiquinol oxidase, subunit I; K00425 cytochrome d ubiquinol oxidase subunit I; Psort location: CytoplasmicMembrane, score: 10.00.
       0.471
CydB
KEGG: btc:CT43_CH1891 3.7e-99 cydB1; cytochrome d ubiquinol oxidase subunit II; K00426 cytochrome d ubiquinol oxidase subunit II; Psort location: CytoplasmicMembrane, score: 10.00.
       0.471
CydD
Thiol reductant ABC exporter, CydD subunit; KEGG: lbh:Lbuc_1616 1.3e-101 cysteine ABC transporter permease/ATP-binding protein CydD K16013; Psort location: CytoplasmicMembrane, score: 10.00.
       0.471
KXB58361.1
Thiol reductant ABC exporter, CydC subunit; KEGG: bya:BANAU_3780 4.2e-107 cydD; Lipid A export ATP-binding/permease protein msbA K16012; Psort location: CytoplasmicMembrane, score: 10.00.
       0.471
KXB59684.1
Signal peptide protein, YSIRK family; KEGG: gtn:GTNG_2102 1.6e-09 penicillin-binding proteins 1A and 1B; K05366 penicillin-binding protein 1A.
  
     0.460
Your Current Organism:
Gemella haemolysans
NCBI taxonomy Id: 1379
Other names: ATCC 10379, CCUG 37985, CIP 101126, G. haemolysans, LMG 18984, LMG:18984, NCTC 12968, Neisseria haemolysans
Server load: medium (50%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.