STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXB58270.1Hypothetical protein; KEGG: dpp:DICPUDRAFT_92261 0.00042 hypothetical protein; K02326 DNA polymerase epsilon subunit 3; Psort location: Cytoplasmic, score: 7.50. (60 aa)    
Predicted Functional Partners:
KXB58266.1
Putative ComG operon protein 3; Required for transformation and DNA binding.
       0.741
KXB58267.1
Prepilin-type cleavage/methylation protein.
       0.741
KXB58268.1
Prepilin-type cleavage/methylation protein.
       0.741
KXB58269.1
Prepilin-type cleavage/methylation protein.
       0.741
KXB58264.1
ComG operon protein 1 family protein; KEGG: cco:CCC13826_1231 1.2e-45 L(+)-tartrate dehydratase subunit beta (L-TTD beta) K02454; Psort location: Cytoplasmic, score: 9.89.
       0.726
KXB58265.1
Bacterial type II secretion system protein F domain protein; KEGG: pfe:PSF113_5005 1.5e-11 pilC; protein PilC K02653; Psort location: CytoplasmicMembrane, score: 10.00.
       0.726
ImmR
DNA-binding helix-turn-helix protein; KEGG: cce:Ccel_3317 0.00042 XRE family transcriptional regulator; K01356 repressor LexA.
       0.481
KXB58271.1
Hypothetical protein; KEGG: top:TOPB45_0624 0.0064 pyrroline-5-carboxylate reductase K00286.
       0.406
YihY
YihY family protein; KEGG: sud:ST398NM01_1976 1.4e-51 Ribonuclease BN K07058; Psort location: CytoplasmicMembrane, score: 10.00; Belongs to the UPF0761 family.
       0.406
Your Current Organism:
Gemella haemolysans
NCBI taxonomy Id: 1379
Other names: ATCC 10379, CCUG 37985, CIP 101126, G. haemolysans, LMG 18984, LMG:18984, NCTC 12968, Neisseria haemolysans
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