Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
KXB58270.1 | KXB58271.1 | HMPREF3186_01452 | HMPREF3186_01453 | Hypothetical protein; KEGG: dpp:DICPUDRAFT_92261 0.00042 hypothetical protein; K02326 DNA polymerase epsilon subunit 3; Psort location: Cytoplasmic, score: 7.50. | Hypothetical protein; KEGG: top:TOPB45_0624 0.0064 pyrroline-5-carboxylate reductase K00286. | 0.406 |
KXB58270.1 | YihY | HMPREF3186_01452 | HMPREF3186_01454 | Hypothetical protein; KEGG: dpp:DICPUDRAFT_92261 0.00042 hypothetical protein; K02326 DNA polymerase epsilon subunit 3; Psort location: Cytoplasmic, score: 7.50. | YihY family protein; KEGG: sud:ST398NM01_1976 1.4e-51 Ribonuclease BN K07058; Psort location: CytoplasmicMembrane, score: 10.00; Belongs to the UPF0761 family. | 0.406 |
KXB58271.1 | KXB58270.1 | HMPREF3186_01453 | HMPREF3186_01452 | Hypothetical protein; KEGG: top:TOPB45_0624 0.0064 pyrroline-5-carboxylate reductase K00286. | Hypothetical protein; KEGG: dpp:DICPUDRAFT_92261 0.00042 hypothetical protein; K02326 DNA polymerase epsilon subunit 3; Psort location: Cytoplasmic, score: 7.50. | 0.406 |
KXB58271.1 | YihY | HMPREF3186_01453 | HMPREF3186_01454 | Hypothetical protein; KEGG: top:TOPB45_0624 0.0064 pyrroline-5-carboxylate reductase K00286. | YihY family protein; KEGG: sud:ST398NM01_1976 1.4e-51 Ribonuclease BN K07058; Psort location: CytoplasmicMembrane, score: 10.00; Belongs to the UPF0761 family. | 0.773 |
YihY | KXB58270.1 | HMPREF3186_01454 | HMPREF3186_01452 | YihY family protein; KEGG: sud:ST398NM01_1976 1.4e-51 Ribonuclease BN K07058; Psort location: CytoplasmicMembrane, score: 10.00; Belongs to the UPF0761 family. | Hypothetical protein; KEGG: dpp:DICPUDRAFT_92261 0.00042 hypothetical protein; K02326 DNA polymerase epsilon subunit 3; Psort location: Cytoplasmic, score: 7.50. | 0.406 |
YihY | KXB58271.1 | HMPREF3186_01454 | HMPREF3186_01453 | YihY family protein; KEGG: sud:ST398NM01_1976 1.4e-51 Ribonuclease BN K07058; Psort location: CytoplasmicMembrane, score: 10.00; Belongs to the UPF0761 family. | Hypothetical protein; KEGG: top:TOPB45_0624 0.0064 pyrroline-5-carboxylate reductase K00286. | 0.773 |