STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
YihYYihY family protein; KEGG: sud:ST398NM01_1976 1.4e-51 Ribonuclease BN K07058; Psort location: CytoplasmicMembrane, score: 10.00; Belongs to the UPF0761 family. (300 aa)    
Predicted Functional Partners:
KXB58271.1
Hypothetical protein; KEGG: top:TOPB45_0624 0.0064 pyrroline-5-carboxylate reductase K00286.
       0.773
YfkJ
Putative low molecular weight protein-tyrosine-phosphatase PtpA; KEGG: lba:Lebu_2236 4.2e-59 protein tyrosine phosphatase; K01104 protein-tyrosine phosphatase; Psort location: Cytoplasmic, score: 7.50; Belongs to the low molecular weight phosphotyrosine protein phosphatase family.
  
  
 0.533
secD
Export membrane protein SecD; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA; Belongs to the SecD/SecF family. SecD subfamily.
 
   
 0.516
polA
DNA-directed DNA polymerase; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity.
 
   
 0.475
KXB59381.1
Kinase domain protein; KEGG: gwc:GWCH70_1067 9.3e-110 serine/threonine protein kinase with PASTA sensor(s); K08884 serine/threonine protein kinase, bacterial; Psort location: CytoplasmicMembrane, score: 9.51.
     
 0.436
msrA
Peptide-methionine (S)-S-oxide reductase; Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine.
     
 0.411
KXB58264.1
ComG operon protein 1 family protein; KEGG: cco:CCC13826_1231 1.2e-45 L(+)-tartrate dehydratase subunit beta (L-TTD beta) K02454; Psort location: Cytoplasmic, score: 9.89.
     
 0.408
KXB58270.1
Hypothetical protein; KEGG: dpp:DICPUDRAFT_92261 0.00042 hypothetical protein; K02326 DNA polymerase epsilon subunit 3; Psort location: Cytoplasmic, score: 7.50.
       0.406
Your Current Organism:
Gemella haemolysans
NCBI taxonomy Id: 1379
Other names: ATCC 10379, CCUG 37985, CIP 101126, G. haemolysans, LMG 18984, LMG:18984, NCTC 12968, Neisseria haemolysans
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