STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
YcaMAmino acid permease; KEGG: eab:ECABU_c01170 5.8e-06 aroP; aromatic amino acid transport protein AroP K11734; Psort location: CytoplasmicMembrane, score: 10.00. (468 aa)    
Predicted Functional Partners:
Apu
Alpha amylase, catalytic domain protein; KEGG: ssg:Selsp_2025 7.1e-112 4-alpha-glucanotransferase K00705; Psort location: Cellwall, score: 8.97.
  
 0.644
DltA
KEGG: dsy:DSY0221 1.4e-106 D-alanine--poly(phosphoribitol) ligase subunit 1 K03367; Psort location: Cytoplasmic, score: 9.67; Belongs to the ATP-dependent AMP-binding enzyme family.
 
 
 0.444
DltD
DltD protein; KEGG: pfa:PF13_0120 2.5e-05 conserved Plasmodium protein, unknown function.
  
     0.409
KXB62880.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 10.00.
 
     0.405
Your Current Organism:
Gemella haemolysans
NCBI taxonomy Id: 1379
Other names: ATCC 10379, CCUG 37985, CIP 101126, G. haemolysans, LMG 18984, LMG:18984, NCTC 12968, Neisseria haemolysans
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.