Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
KXB58244.1 | KXB58245.1 | HMPREF3186_01482 | HMPREF3186_01483 | Hypothetical protein; KEGG: hpa:HPAG1_1080 9.9e-22 hypothetical protein; K01553 myosin ATPase; Psort location: Cytoplasmic, score: 7.50. | DNA (cytosine-5-)-methyltransferase; KEGG: hiz:R2866_1343 8.0e-120 mod; Type III restriction-modification system methylase (M.HindVIP); Psort location: Cytoplasmic, score: 7.50. | 0.724 |
KXB58244.1 | KXB58246.1 | HMPREF3186_01482 | HMPREF3186_01484 | Hypothetical protein; KEGG: hpa:HPAG1_1080 9.9e-22 hypothetical protein; K01553 myosin ATPase; Psort location: Cytoplasmic, score: 7.50. | Type III restriction enzyme, res subunit; KEGG: kol:Kole_0061 3.5e-181 Type III site-specific deoxyribonuclease; Psort location: Cytoplasmic, score: 7.50. | 0.723 |
KXB58244.1 | KXB58247.1 | HMPREF3186_01482 | HMPREF3186_01485 | Hypothetical protein; KEGG: hpa:HPAG1_1080 9.9e-22 hypothetical protein; K01553 myosin ATPase; Psort location: Cytoplasmic, score: 7.50. | Hypothetical protein. | 0.423 |
KXB58245.1 | KXB58244.1 | HMPREF3186_01483 | HMPREF3186_01482 | DNA (cytosine-5-)-methyltransferase; KEGG: hiz:R2866_1343 8.0e-120 mod; Type III restriction-modification system methylase (M.HindVIP); Psort location: Cytoplasmic, score: 7.50. | Hypothetical protein; KEGG: hpa:HPAG1_1080 9.9e-22 hypothetical protein; K01553 myosin ATPase; Psort location: Cytoplasmic, score: 7.50. | 0.724 |
KXB58245.1 | KXB58246.1 | HMPREF3186_01483 | HMPREF3186_01484 | DNA (cytosine-5-)-methyltransferase; KEGG: hiz:R2866_1343 8.0e-120 mod; Type III restriction-modification system methylase (M.HindVIP); Psort location: Cytoplasmic, score: 7.50. | Type III restriction enzyme, res subunit; KEGG: kol:Kole_0061 3.5e-181 Type III site-specific deoxyribonuclease; Psort location: Cytoplasmic, score: 7.50. | 0.948 |
KXB58245.1 | KXB58247.1 | HMPREF3186_01483 | HMPREF3186_01485 | DNA (cytosine-5-)-methyltransferase; KEGG: hiz:R2866_1343 8.0e-120 mod; Type III restriction-modification system methylase (M.HindVIP); Psort location: Cytoplasmic, score: 7.50. | Hypothetical protein. | 0.448 |
KXB58246.1 | KXB58244.1 | HMPREF3186_01484 | HMPREF3186_01482 | Type III restriction enzyme, res subunit; KEGG: kol:Kole_0061 3.5e-181 Type III site-specific deoxyribonuclease; Psort location: Cytoplasmic, score: 7.50. | Hypothetical protein; KEGG: hpa:HPAG1_1080 9.9e-22 hypothetical protein; K01553 myosin ATPase; Psort location: Cytoplasmic, score: 7.50. | 0.723 |
KXB58246.1 | KXB58245.1 | HMPREF3186_01484 | HMPREF3186_01483 | Type III restriction enzyme, res subunit; KEGG: kol:Kole_0061 3.5e-181 Type III site-specific deoxyribonuclease; Psort location: Cytoplasmic, score: 7.50. | DNA (cytosine-5-)-methyltransferase; KEGG: hiz:R2866_1343 8.0e-120 mod; Type III restriction-modification system methylase (M.HindVIP); Psort location: Cytoplasmic, score: 7.50. | 0.948 |
KXB58246.1 | KXB58247.1 | HMPREF3186_01484 | HMPREF3186_01485 | Type III restriction enzyme, res subunit; KEGG: kol:Kole_0061 3.5e-181 Type III site-specific deoxyribonuclease; Psort location: Cytoplasmic, score: 7.50. | Hypothetical protein. | 0.448 |
KXB58247.1 | KXB58244.1 | HMPREF3186_01485 | HMPREF3186_01482 | Hypothetical protein. | Hypothetical protein; KEGG: hpa:HPAG1_1080 9.9e-22 hypothetical protein; K01553 myosin ATPase; Psort location: Cytoplasmic, score: 7.50. | 0.423 |
KXB58247.1 | KXB58245.1 | HMPREF3186_01485 | HMPREF3186_01483 | Hypothetical protein. | DNA (cytosine-5-)-methyltransferase; KEGG: hiz:R2866_1343 8.0e-120 mod; Type III restriction-modification system methylase (M.HindVIP); Psort location: Cytoplasmic, score: 7.50. | 0.448 |
KXB58247.1 | KXB58246.1 | HMPREF3186_01485 | HMPREF3186_01484 | Hypothetical protein. | Type III restriction enzyme, res subunit; KEGG: kol:Kole_0061 3.5e-181 Type III site-specific deoxyribonuclease; Psort location: Cytoplasmic, score: 7.50. | 0.448 |