STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
YutDHypothetical protein. (95 aa)    
Predicted Functional Partners:
KXB57818.1
Hypothetical protein; KEGG: lsl:LSL_0075 2.0e-10 dacC; D-alanyl-D-alanine serine-type carboxypeptidase K07258.
       0.773
KXB59248.1
Bacterial ABC transporter protein EcsB; Psort location: CytoplasmicMembrane, score: 10.00.
  
     0.686
KXB61961.1
Hypothetical protein; Psort location: Cytoplasmic, score: 7.50; Belongs to the UPF0358 family.
  
     0.634
recX
Regulatory protein RecX; Modulates RecA activity; Belongs to the RecX family.
  
     0.593
YqeH
Ribosome biogenesis GTPase YqeH; KEGG: bcy:Bcer98_3061 2.9e-106 GTP-binding protein YqeH K06948; Psort location: Cytoplasmic, score: 7.50.
  
     0.579
KXB62262.1
CvpA family protein; Psort location: CytoplasmicMembrane, score: 10.00.
  
     0.539
KXB62240.1
HAD hydrolase family; KEGG: suq:HMPREF0772_12318 8.7e-59 pdxp; pyridoxal phosphate phosphatase; Psort location: Cytoplasmic, score: 7.50.
 
  
 0.534
KXB62849.1
KEGG: lsp:Bsph_4142 2.3e-42 hypothetical protein; K00571 site-specific DNA-methyltransferase (adenine-specific).
 
     0.505
DnaB
Replication initiation and membrane attachment protein, DnaB/DnaD family; KEGG: sax:USA300HOU_1672 7.4e-30 dnaB2; replicative DNA helicase K03346; Psort location: Cytoplasmic, score: 7.50.
  
    0.493
ActIII
KEGG: btk:BT9727_3881 6.9e-50 oxidoreductase, short-chain dehydrogenase/reductase K07124; Psort location: Cytoplasmic, score: 9.97; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
 
     0.487
Your Current Organism:
Gemella haemolysans
NCBI taxonomy Id: 1379
Other names: ATCC 10379, CCUG 37985, CIP 101126, G. haemolysans, LMG 18984, LMG:18984, NCTC 12968, Neisseria haemolysans
Server load: medium (46%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.