STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TmpC_2Basic membrane protein; KEGG: apb:SAR116_1606 3.0e-33 membrane lipoprotein K07335. (385 aa)    
Predicted Functional Partners:
MglA
ABC transporter, ATP-binding protein; KEGG: bip:Bint_0295 5.5e-144 ABC transporter; K02056 simple sugar transport system ATP-binding protein; Psort location: CytoplasmicMembrane, score: 8.78.
 
 0.987
KXB57750.1
Branched-chain amino acid ABC transporter, permease protein; KEGG: mdi:METDI2374 5.4e-27 ABC transporter permease K02057; Psort location: CytoplasmicMembrane, score: 10.00; Belongs to the binding-protein-dependent transport system permease family.
 
 
 0.980
KXB57751.1
Branched-chain amino acid ABC transporter, permease protein; KEGG: apb:SAR116_1608 4.0e-38 inner-membrane translocator K02057; Psort location: CytoplasmicMembrane, score: 10.00; Belongs to the binding-protein-dependent transport system permease family.
 
 
 0.980
guaA
GMP synthase domain protein; Catalyzes the synthesis of GMP from XMP.
     
 0.426
Your Current Organism:
Gemella haemolysans
NCBI taxonomy Id: 1379
Other names: ATCC 10379, CCUG 37985, CIP 101126, G. haemolysans, LMG 18984, LMG:18984, NCTC 12968, Neisseria haemolysans
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