Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| Hit | KXB59669.1 | HMPREF3186_01593 | HMPREF3186_01023 | Putative protein hit; KEGG: slg:SLGD_01125 1.6e-36 asymmetrical Bis(5'-nucleosyl)-tetraphosphatase K02503; Psort location: Cytoplasmic, score: 7.50. | Helicase protein; KEGG: ftf:FTF0244 1.4e-161 DNA/RNA helicase; K01529. | 0.477 |
| Hit | PbpX | HMPREF3186_01593 | HMPREF3186_00447 | Putative protein hit; KEGG: slg:SLGD_01125 1.6e-36 asymmetrical Bis(5'-nucleosyl)-tetraphosphatase K02503; Psort location: Cytoplasmic, score: 7.50. | KEGG: mcl:MCCL_0753 1.1e-154 pbpA; penicillin-binding protein 1; K12552 penicillin-binding protein 1; Psort location: CytoplasmicMembrane, score: 9.51. | 0.470 |
| Hit | PgcA | HMPREF3186_01593 | HMPREF3186_01267 | Putative protein hit; KEGG: slg:SLGD_01125 1.6e-36 asymmetrical Bis(5'-nucleosyl)-tetraphosphatase K02503; Psort location: Cytoplasmic, score: 7.50. | KEGG: cst:CLOST_1665 7.7e-186 phosphoglucomutase; Psort location: Cytoplasmic, score: 7.50. | 0.699 |
| Hit | PunA | HMPREF3186_01593 | HMPREF3186_01592 | Putative protein hit; KEGG: slg:SLGD_01125 1.6e-36 asymmetrical Bis(5'-nucleosyl)-tetraphosphatase K02503; Psort location: Cytoplasmic, score: 7.50. | Inosine guanosine and xanthosine phosphorylase family protein; The purine nucleoside phosphorylases catalyze the phosphorolytic breakdown of the N-glycosidic bond in the beta- (deoxy)ribonucleoside molecules, with the formation of the corresponding free purine bases and pentose-1-phosphate. | 0.762 |
| Hit | rplL | HMPREF3186_01593 | HMPREF3186_01410 | Putative protein hit; KEGG: slg:SLGD_01125 1.6e-36 asymmetrical Bis(5'-nucleosyl)-tetraphosphatase K02503; Psort location: Cytoplasmic, score: 7.50. | Ribosomal protein L7/L12; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. Is thus essential for accurate translation; Belongs to the bacterial ribosomal protein bL12 family. | 0.404 |
| KXB59669.1 | Hit | HMPREF3186_01023 | HMPREF3186_01593 | Helicase protein; KEGG: ftf:FTF0244 1.4e-161 DNA/RNA helicase; K01529. | Putative protein hit; KEGG: slg:SLGD_01125 1.6e-36 asymmetrical Bis(5'-nucleosyl)-tetraphosphatase K02503; Psort location: Cytoplasmic, score: 7.50. | 0.477 |
| PbpX | Hit | HMPREF3186_00447 | HMPREF3186_01593 | KEGG: mcl:MCCL_0753 1.1e-154 pbpA; penicillin-binding protein 1; K12552 penicillin-binding protein 1; Psort location: CytoplasmicMembrane, score: 9.51. | Putative protein hit; KEGG: slg:SLGD_01125 1.6e-36 asymmetrical Bis(5'-nucleosyl)-tetraphosphatase K02503; Psort location: Cytoplasmic, score: 7.50. | 0.470 |
| PbpX | PgcA | HMPREF3186_00447 | HMPREF3186_01267 | KEGG: mcl:MCCL_0753 1.1e-154 pbpA; penicillin-binding protein 1; K12552 penicillin-binding protein 1; Psort location: CytoplasmicMembrane, score: 9.51. | KEGG: cst:CLOST_1665 7.7e-186 phosphoglucomutase; Psort location: Cytoplasmic, score: 7.50. | 0.409 |
| PgcA | Hit | HMPREF3186_01267 | HMPREF3186_01593 | KEGG: cst:CLOST_1665 7.7e-186 phosphoglucomutase; Psort location: Cytoplasmic, score: 7.50. | Putative protein hit; KEGG: slg:SLGD_01125 1.6e-36 asymmetrical Bis(5'-nucleosyl)-tetraphosphatase K02503; Psort location: Cytoplasmic, score: 7.50. | 0.699 |
| PgcA | PbpX | HMPREF3186_01267 | HMPREF3186_00447 | KEGG: cst:CLOST_1665 7.7e-186 phosphoglucomutase; Psort location: Cytoplasmic, score: 7.50. | KEGG: mcl:MCCL_0753 1.1e-154 pbpA; penicillin-binding protein 1; K12552 penicillin-binding protein 1; Psort location: CytoplasmicMembrane, score: 9.51. | 0.409 |
| PgcA | PunA | HMPREF3186_01267 | HMPREF3186_01592 | KEGG: cst:CLOST_1665 7.7e-186 phosphoglucomutase; Psort location: Cytoplasmic, score: 7.50. | Inosine guanosine and xanthosine phosphorylase family protein; The purine nucleoside phosphorylases catalyze the phosphorolytic breakdown of the N-glycosidic bond in the beta- (deoxy)ribonucleoside molecules, with the formation of the corresponding free purine bases and pentose-1-phosphate. | 0.641 |
| PunA | Hit | HMPREF3186_01592 | HMPREF3186_01593 | Inosine guanosine and xanthosine phosphorylase family protein; The purine nucleoside phosphorylases catalyze the phosphorolytic breakdown of the N-glycosidic bond in the beta- (deoxy)ribonucleoside molecules, with the formation of the corresponding free purine bases and pentose-1-phosphate. | Putative protein hit; KEGG: slg:SLGD_01125 1.6e-36 asymmetrical Bis(5'-nucleosyl)-tetraphosphatase K02503; Psort location: Cytoplasmic, score: 7.50. | 0.762 |
| PunA | PgcA | HMPREF3186_01592 | HMPREF3186_01267 | Inosine guanosine and xanthosine phosphorylase family protein; The purine nucleoside phosphorylases catalyze the phosphorolytic breakdown of the N-glycosidic bond in the beta- (deoxy)ribonucleoside molecules, with the formation of the corresponding free purine bases and pentose-1-phosphate. | KEGG: cst:CLOST_1665 7.7e-186 phosphoglucomutase; Psort location: Cytoplasmic, score: 7.50. | 0.641 |
| rplL | Hit | HMPREF3186_01410 | HMPREF3186_01593 | Ribosomal protein L7/L12; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. Is thus essential for accurate translation; Belongs to the bacterial ribosomal protein bL12 family. | Putative protein hit; KEGG: slg:SLGD_01125 1.6e-36 asymmetrical Bis(5'-nucleosyl)-tetraphosphatase K02503; Psort location: Cytoplasmic, score: 7.50. | 0.404 |