STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GrdDFatty acid/phospholipid synthesis protein PlsX; KEGG: cdf:CD2348 1.7e-140 grdD; glycine/sarcosine/betaine reductase complex component C subunit alpha K10670; Psort location: Cytoplasmic, score: 7.50. (380 aa)    
Predicted Functional Partners:
GrdC
KEGG: cdf:CD2349 1.8e-209 grdC; glycine/sarcosine/betaine reductase complex component C subunit beta; K10670 glycine reductase; K10671 sarcosine reductase K10672; Psort location: Cytoplasmic, score: 7.50.
  
 0.997
KXB57763.1
Selenoprotein B, glycine/betaine/sarcosine/D-proline reductase domain protein; KEGG: cdf:CD2351 7.4e-30 grdB; glycine reductase complex component B gamma subunit K10670; Psort location: Cytoplasmic, score: 7.50.
 
     0.916
GrdB
Putative glycine reductase, selenoprotein B; KEGG: cdl:CDR20291_2239 5.4e-137 grdB; glycine reductase complex component B subunit gamma; K10670 glycine reductase; Psort location: Cytoplasmic, score: 7.50.
 
   
 0.910
GrdA1
KEGG: fma:FMG_0428 1.7e-37 putative glycine/sarcosine/betaine reductase complex protein A; K10670 glycine reductase; K10671 sarcosine reductase K10672; Psort location: CytoplasmicMembrane, score: 9.55.
 
   
 0.889
GrdA
Hypothetical protein; KEGG: cdf:CD2352 4.1e-13 grdA; glycine/sarcosine/betaine reductase complex protein A; K10670 glycine reductase; K10671 sarcosine reductase K10672.
 
     0.883
GrdE
Glycine reductase, subunit ABC; KEGG: cdg:CDBI1_11375 2.3e-186 glycine reductase complex component B subunits alpha/beta; K10670 glycine reductase; Psort location: Cytoplasmic, score: 9.97.
 
   
 0.873
KXB57770.1
GrdX family protein.
 
   
 0.853
TrxA_1
Thioredoxin; KEGG: ant:Arnit_1790 8.2e-15 thioredoxin; K03672 thioredoxin 2; Belongs to the thioredoxin family.
 
     0.661
rpmF
Ribosomal protein L32; KEGG: apb:SAR116_0011 3.1e-08 50S ribosomal protein L32 K02911; Psort location: Cytoplasmic, score: 9.67; Belongs to the bacterial ribosomal protein bL32 family.
  
  
 0.609
rplF
Ribosomal protein L6; This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7/L12 stalk, and near the tRNA binding site of the peptidyltransferase center; Belongs to the universal ribosomal protein uL6 family.
   
   0.584
Your Current Organism:
Gemella haemolysans
NCBI taxonomy Id: 1379
Other names: ATCC 10379, CCUG 37985, CIP 101126, G. haemolysans, LMG 18984, LMG:18984, NCTC 12968, Neisseria haemolysans
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