STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LolD_3KEGG: efl:EF62_2234 4.9e-72 ABC transporter family protein K02003; Psort location: CytoplasmicMembrane, score: 9.96. (210 aa)    
Predicted Functional Partners:
MacB_1
Efflux ABC transporter, permease protein; KEGG: bya:BANAU_0335 5.2e-22 yclI; Macrolide export ATP-binding/permease protein macB K02004; Psort location: CytoplasmicMembrane, score: 10.00.
 
 
 0.973
KXB57653.1
Efflux ABC transporter, permease protein; KEGG: bya:BANAU_0335 1.6e-34 yclI; Macrolide export ATP-binding/permease protein macB K02004; Psort location: CytoplasmicMembrane, score: 10.00.
 
 
 0.968
ArtQ
Putative arginine ABC transporter, permease protein ArtQ; KEGG: rcm:A1E_00665 3.7e-44 sdhA; succinate dehydrogenase flavoprotein subunit K02029; Psort location: CytoplasmicMembrane, score: 9.99.
 
  
 0.831
KXB63080.1
Efflux ABC transporter, permease protein; KEGG: sgg:SGGBAA2069_c11620 8.6e-123 putative ABC transporter permease K02004; Psort location: CytoplasmicMembrane, score: 9.35.
 
 
 0.617
KXB64333.1
Efflux ABC transporter, permease protein; KEGG: efu:HMPREF0351_10749 3.0e-38 ABC superfamily ATP binding cassette transporter, membrane protein K02004; Psort location: CytoplasmicMembrane, score: 10.00.
 
 0.594
KXB59836.1
Efflux ABC transporter, permease protein; KEGG: ljf:FI9785_1686 1.7e-48 ABC transporter permease K02004; Psort location: CytoplasmicMembrane, score: 10.00.
 
 
 0.541
KXB58495.1
KEGG: efc:EFAU004_00424 9.2e-158 ABC transporter ATP-binding protein/permease; Psort location: CytoplasmicMembrane, score: 10.00.
 
 
0.539
KXB58925.1
Efflux ABC transporter, permease protein; KEGG: sgg:SGGBAA2069_c11620 2.2e-06 putative ABC transporter permease K02004; Psort location: CytoplasmicMembrane, score: 10.00.
  
 
 0.531
SsuB
KEGG: sgo:SGO_2099 1.8e-74 ABC transporter ATP-binding protein K15600; Psort location: CytoplasmicMembrane, score: 9.99.
   
0.474
GsiA_2
Putative dipeptide ABC transporter, ATP-binding protein DppD; KEGG: gth:Geoth_2280 1.1e-56 oligopeptide/dipeptide ABC transporter ATPase K02031; Psort location: CytoplasmicMembrane, score: 8.78.
 
     
0.473
Your Current Organism:
Gemella haemolysans
NCBI taxonomy Id: 1379
Other names: ATCC 10379, CCUG 37985, CIP 101126, G. haemolysans, LMG 18984, LMG:18984, NCTC 12968, Neisseria haemolysans
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