STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PhnD_4Phosphate/phosphite/phosphonate ABC transporter, periplasmic binding protein; KEGG: ebe:B21_03937 4.0e-22 phnD; PhnD, subunit of PhnC/PhnD/PhnE alkylphosphonate ABC transporter K02044. (295 aa)    
Predicted Functional Partners:
KXB59559.1
Phosphate/phosphite/phosphonate ABC transporter, periplasmic binding protein; KEGG: ebe:B21_03937 3.2e-09 phnD; PhnD, subunit of PhnC/PhnD/PhnE alkylphosphonate ABC transporter K02044.
 
  
 
0.967
PhnE
KEGG: crn:CAR_c20660 3.7e-30 phosphonate ABC transporter permease K02042; Psort location: CytoplasmicMembrane, score: 10.00.
 
 
 0.964
PhnD_1
Hypothetical protein; KEGG: ebe:B21_03937 0.0016 phnD; PhnD, subunit of PhnC/PhnD/PhnE alkylphosphonate ABC transporter K02044; Psort location: Cytoplasmic, score: 7.50.
  
  
  0.919
phnC
Phosphonate ABC transporter, ATP-binding protein; Part of the ABC transporter complex PhnCDE involved in phosphonates import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Phosphonates importer (TC 3.A.1.9.1) family.
 
  
 0.907
PhnD_3
Phosphate/phosphite/phosphonate ABC transporter, periplasmic binding protein; KEGG: ebe:B21_03937 4.3e-25 phnD; PhnD, subunit of PhnC/PhnD/PhnE alkylphosphonate ABC transporter K02044; Psort location: CytoplasmicMembrane, score: 9.55.
  
  
 
0.902
ruvA
Holliday junction DNA helicase RuvA; The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. RuvA stimulates, in the presence of DNA, the weak ATPase activity of RuvB.
       0.497
ruvB
Holliday junction DNA helicase RuvB; The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing.
       0.463
KXB57462.1
Hypothetical protein; KEGG: snv:SPNINV200_10720 0. zmpA; IgA-protease; Psort location: Cellwall, score: 9.20.
   
    0.461
OpuCC
ABC transporter, substrate-binding protein, QAT family; KEGG: stj:SALIVA_1161 3.5e-165 glycine betaine/L-proline ABC transporter,permease/glycine betaine/L-proline-binding protein; Psort location: CytoplasmicMembrane, score: 10.00.
    
  0.460
Your Current Organism:
Gemella haemolysans
NCBI taxonomy Id: 1379
Other names: ATCC 10379, CCUG 37985, CIP 101126, G. haemolysans, LMG 18984, LMG:18984, NCTC 12968, Neisseria haemolysans
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