STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GloAKEGG: efu:HMPREF0351_12081 6.4e-47 gloA3; lactoylglutathione lyase K01759; Psort location: Cytoplasmic, score: 7.50. (127 aa)    
Predicted Functional Partners:
AldA
Putative succinate-semialdehyde dehydrogenase; KEGG: nmq:NMBM04240196_1906 4.9e-168 aldA; aldehyde dehydrogenase A K07248; Psort location: Cytoplasmic, score: 9.97.
  
 
 0.916
HchA
Protein in dcm-seru intergenic region; KEGG: reh:H16_B1347 1.4e-74 chaperone protein HchA K05523; Psort location: Cytoplasmic, score: 9.67.
  
 
 0.911
KXB59577.1
Metallo-beta-lactamase domain protein; KEGG: efu:HMPREF0351_11255 8.7e-43 gloB; hydroxyacylglutathione hydrolase; Psort location: Cytoplasmic, score: 7.50.
  
 
 0.908
PspE
Rhodanese-like protein; KEGG: mrb:Mrub_2849 2.8e-16 beta-lactamase domain-containing protein; K01069 hydroxyacylglutathione hydrolase.
  
 
 0.903
trpB
Tryptophan synthase, beta subunit; The beta subunit is responsible for the synthesis of L- tryptophan from indole and L-serine.
  
  0.838
SdhA
KEGG: ssd:SPSINT_0935 2.8e-92 L-serine dehydratase subunit alpha K01752; Belongs to the iron-sulfur dependent L-serine dehydratase family.
  
 
  0.808
SdhB
KEGG: ssd:SPSINT_0934 7.4e-46 L-serine dehydratase subunit beta K01752; Psort location: Cytoplasmic, score: 7.50; Belongs to the iron-sulfur dependent L-serine dehydratase family.
  
 
  0.807
DegV
EDD domain protein, DegV family; KEGG: mgf:MGF_3873 5.3e-20 DegV-like protein; Psort location: Cytoplasmic, score: 7.50.
  
    0.689
KXB57226.1
Nitroreductase family protein; KEGG: ssd:SPSINT_2154 4.5e-46 nitroreductase; K00540; Psort location: Cytoplasmic, score: 9.97.
 
  
 0.627
nusG
Transcription termination/antitermination factor NusG; Participates in transcription elongation, termination and antitermination.
  
    0.596
Your Current Organism:
Gemella haemolysans
NCBI taxonomy Id: 1379
Other names: ATCC 10379, CCUG 37985, CIP 101126, G. haemolysans, LMG 18984, LMG:18984, NCTC 12968, Neisseria haemolysans
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