STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RlmAMethyltransferase domain protein; KEGG: sor:SOR_0124 5.2e-45 rrmA; rRNA (guanine-N1-)-methyltransferase, 23S rRNA; K00563 23S rRNA (guanine745-N1)-methyltransferase; Psort location: Cytoplasmic, score: 9.97. (271 aa)    
Predicted Functional Partners:
KXB57221.1
Hypothetical protein; Psort location: Cytoplasmic, score: 7.50.
       0.634
KXB57222.1
Competence protein CoiA-like protein; Psort location: Cytoplasmic, score: 7.50.
       0.476
KXB57223.1
DNA protecting protein DprA; KEGG: ccm:Ccan_01460 5.8e-30 protein smf K04096; Psort location: Cytoplasmic, score: 7.50.
       0.466
KXB57224.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 9.55.
       0.435
Your Current Organism:
Gemella haemolysans
NCBI taxonomy Id: 1379
Other names: ATCC 10379, CCUG 37985, CIP 101126, G. haemolysans, LMG 18984, LMG:18984, NCTC 12968, Neisseria haemolysans
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.