STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MetN2_3KEGG: snc:HMPREF0837_11946 3.8e-42 ABC transporter ATP-binding protein K01990; Psort location: CytoplasmicMembrane, score: 8.78. (200 aa)    
Predicted Functional Partners:
KXB57260.1
Hypothetical protein; KEGG: api:7055882 2.3e-06 ND4; NADH dehydrogenase subunit 4; K03881 NADH-ubiquinone oxidoreductase chain 4; Psort location: CytoplasmicMembrane, score: 10.00.
       0.752
KXB57261.1
Hypothetical protein; KEGG: crp:CRP_003 3.4e-07 F0F1-type ATP synthase A subunit; K02108 F-type H+-transporting ATPase subunit a; Psort location: CytoplasmicMembrane, score: 10.00.
       0.752
KXB64335.1
ABC transporter, ATP-binding protein; KEGG: cle:Clole_4126 1.3e-50 xenobiotic-transporting ATPase; Psort location: CytoplasmicMembrane, score: 10.00.
  
     0.713
MsbA_2
ABC transporter, ATP-binding protein; KEGG: tcx:Tcr_1519 7.8e-42 Lipid A export ATP-binding/permease MsbA; K11085 ATP-binding cassette, subfamily B, bacterial MsbA; Psort location: CytoplasmicMembrane, score: 10.00.
  
     0.711
ecfA-2
ABC transporter, ATP-binding protein; ATP-binding (A) component of a common energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates.
  
     0.663
KXB64331.1
ABC transporter, ATP-binding protein; KEGG: ssr:SALIVB_0212 5.3e-68 msbA; lipid A export ATP-binding/permease msbA; Psort location: CytoplasmicMembrane, score: 10.00.
  
     0.629
KXB57258.1
Hypothetical protein.
       0.535
KXB57259.1
Hypothetical protein.
       0.535
YhaP
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 10.00.
 
  
 0.528
KXB64338.1
ABC transporter, ATP-binding protein; KEGG: hiq:CGSHiGG_06600 1.5e-72 aroE; shikimate 5-dehydrogenase K06148; Psort location: CytoplasmicMembrane, score: 10.00.
  
     0.520
Your Current Organism:
Gemella haemolysans
NCBI taxonomy Id: 1379
Other names: ATCC 10379, CCUG 37985, CIP 101126, G. haemolysans, LMG 18984, LMG:18984, NCTC 12968, Neisseria haemolysans
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