STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MngR_1KEGG: bya:BANAU_2956 8.0e-17 ytrA; GntR family transcriptional regulator; Psort location: Cytoplasmic, score: 7.50. (134 aa)    
Predicted Functional Partners:
LptB_2
ABC transporter, ATP-binding protein; KEGG: cle:Clole_0141 6.1e-35 sugar ABC transporter ATPase K09687; Psort location: CytoplasmicMembrane, score: 9.96.
 
  
 0.724
KXB57263.1
Hypothetical protein; KEGG: ccv:CCV52592_1824 0.0021 phosphoglycerate kinase; Psort location: CytoplasmicMembrane, score: 10.00.
       0.528
KXB57264.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 10.00.
       0.527
KXB57268.1
Hypothetical protein; KEGG: pfa:PFF0915w 0.0014 N-acetylglucosamine transferase K03860; Psort location: CytoplasmicMembrane, score: 10.00.
       0.498
KXB64341.1
KEGG: sgg:SGGBAA2069_c07940 1.7e-78 ABC transporter ATP-binding protein K01990; Psort location: CytoplasmicMembrane, score: 9.96.
  
  
 0.478
KXB60184.1
KEGG: rdn:HMPREF0733_11092 2.3e-51 ABC transporter ATP-binding protein K09687; Psort location: CytoplasmicMembrane, score: 9.51.
  
  
 0.478
LptB_1
KEGG: snc:HMPREF0837_12272 4.0e-93 ABC transporter ATP-binding protein K09687; Psort location: CytoplasmicMembrane, score: 8.78.
  
  
 0.478
KXB58842.1
ABC transporter, ATP-binding protein; KEGG: pmx:PERMA_0463 2.8e-30 manganese transport system ATP-binding protein MntA; K09817 zinc transport system ATP-binding protein; Psort location: CytoplasmicMembrane, score: 8.78.
  
  
 0.478
KXB58768.1
ABC transporter, ATP-binding protein; KEGG: ppo:PPM_0762 6.8e-59 drrA1; spermidine/putrescine import ATP-binding protein potA; Psort location: CytoplasmicMembrane, score: 9.51.
  
  
 0.478
AraC
KEGG: gym:GYMC10_3774 1.0e-10 AraC family transcriptional regulator K13530; Psort location: Cytoplasmic, score: 9.97.
 
  
 0.459
Your Current Organism:
Gemella haemolysans
NCBI taxonomy Id: 1379
Other names: ATCC 10379, CCUG 37985, CIP 101126, G. haemolysans, LMG 18984, LMG:18984, NCTC 12968, Neisseria haemolysans
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