Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
LptB_2ABC transporter, ATP-binding protein; KEGG: cle:Clole_0141 6.1e-35 sugar ABC transporter ATPase K09687; Psort location: CytoplasmicMembrane, score: 9.96. (288 aa)    
Predicted Functional Partners:
KXB57268.1
Hypothetical protein; KEGG: pfa:PFF0915w 0.0014 N-acetylglucosamine transferase K03860; Psort location: CytoplasmicMembrane, score: 10.00.
       0.773
MngR_1
KEGG: bya:BANAU_2956 8.0e-17 ytrA; GntR family transcriptional regulator; Psort location: Cytoplasmic, score: 7.50.
 
  
 0.721
LolD_2
Putative lipoprotein releasing system, ATP-binding protein; KEGG: llk:LLKF_2523 2.8e-69 yxeB; ABC transporter ATP-binding protein K02003; Psort location: CytoplasmicMembrane, score: 8.78.
 
     0.604
ecfA
ABC transporter, ATP-binding protein; ATP-binding (A) component of a common energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates.
  
     0.601
MacB_3
KEGG: ssr:SALIVB_1702 4.6e-69 lipoprotein-releasing system ATP-binding protein lolD K02003; Psort location: CytoplasmicMembrane, score: 8.78.
 
     0.510
HmuV
KEGG: lru:HMPREF0538_21396 1.1e-40 zinc/iron ABC transporter ATP-binding protein K02074; Psort location: CytoplasmicMembrane, score: 9.51.
 
     0.510
MsbA_1
ABC transporter, ATP-binding protein; KEGG: ssr:SALIVB_0212 1.2e-47 msbA; lipid A export ATP-binding/permease msbA; Psort location: CytoplasmicMembrane, score: 10.00.
 
     0.464
ecfA-2
ABC transporter, ATP-binding protein; ATP-binding (A) component of a common energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates.
  
     0.445
KXB64335.1
ABC transporter, ATP-binding protein; KEGG: cle:Clole_4126 1.3e-50 xenobiotic-transporting ATPase; Psort location: CytoplasmicMembrane, score: 10.00.
 
     0.423
YhaP
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 10.00.
 
  
 0.407
Your Current Organism:
Gemella haemolysans
NCBI taxonomy Id: 1379
Other names: ATCC 10379, CCUG 37985, CIP 101126, G. haemolysans, LMG 18984, LMG:18984, NCTC 12968, Neisseria haemolysans
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