STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GsiD_1Putative oligopeptide ABC transporter, permease protein AppC; KEGG: bmd:BMD_1704 1.1e-44 nikC; nickel import ABC transporter permease subunit NikC K15586; Psort location: CytoplasmicMembrane, score: 10.00. (274 aa)    
Predicted Functional Partners:
GsiC_1
Putative oligopeptide ABC transporter, permease protein AppB; KEGG: bmd:BMD_1703 6.0e-51 nikB; nickel import ABC transporter permease subunit NikB K15585; Psort location: CytoplasmicMembrane, score: 10.00.
 
 0.999
GsiC_2
Putative oligopeptide ABC transporter, permease protein AppB; KEGG: bra:BRADO1094 7.4e-46 appB; oligopeptide transport system permease K02033; Psort location: CytoplasmicMembrane, score: 10.00.
 
 0.998
GsiA_3
Putative oligopeptide ABC transporter, ATP-binding protein AppF; KEGG: efc:EFAU004_00135 3.3e-114 oppF; peptide ABC transporter ATP-binding protein K02032; Psort location: CytoplasmicMembrane, score: 8.78.
 
 0.998
GsiA_4
Oligopeptide transport ATP-binding protein OppD; KEGG: efi:OG1RF_12370 3.8e-120 ABC superfamily ATP binding cassette transporter, ABC protein; Psort location: CytoplasmicMembrane, score: 9.96.
 
 0.998
GsiA_2
Putative dipeptide ABC transporter, ATP-binding protein DppD; KEGG: gth:Geoth_2280 1.1e-56 oligopeptide/dipeptide ABC transporter ATPase K02031; Psort location: CytoplasmicMembrane, score: 8.78.
  
 0.997
GsiA_1
Putative oligopeptide ABC transporter, ATP-binding protein OppF; KEGG: gth:Geoth_3050 1.3e-62 oligopeptide/dipeptide ABC transporter ATPase K10823; Psort location: CytoplasmicMembrane, score: 8.78.
  
 0.997
AppA_1
ABC transporter, substrate-binding protein, family 5; KEGG: gwc:GWCH70_0479 9.4e-46 4-phytase K02035; Psort location: Cellwall, score: 9.21.
 0.996
OppA
Hypothetical protein; KEGG: sti:Sthe_1622 2.6e-09 4-phytase.
  
 0.937
GsiD_2
Putative oligopeptide ABC transporter, permease protein AppC; KEGG: efi:OG1RF_12367 2.6e-73 ABC superfamily ATP binding cassette transporter, ABC protein K02034; Psort location: CytoplasmicMembrane, score: 10.00.
  
  
 
0.925
metN
ABC transporter, ATP-binding protein; Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system.
 
  
 0.905
Your Current Organism:
Gemella haemolysans
NCBI taxonomy Id: 1379
Other names: ATCC 10379, CCUG 37985, CIP 101126, G. haemolysans, LMG 18984, LMG:18984, NCTC 12968, Neisseria haemolysans
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