STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
YbaKPutative YbaK/EbsC protein; KEGG: bya:BANAU_2580 1.6e-27 yjdI; prolyl-tRNA synthetase K03976; Belongs to the prolyl-tRNA editing family. YbaK/EbsC subfamily. (163 aa)    
Predicted Functional Partners:
metG
methionine--tRNA ligase; Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation; Belongs to the class-I aminoacyl-tRNA synthetase family. MetG type 2B subfamily.
     
 0.530
GsiA_1
Putative oligopeptide ABC transporter, ATP-binding protein OppF; KEGG: gth:Geoth_3050 1.3e-62 oligopeptide/dipeptide ABC transporter ATPase K10823; Psort location: CytoplasmicMembrane, score: 8.78.
       0.499
GsiA_2
Putative dipeptide ABC transporter, ATP-binding protein DppD; KEGG: gth:Geoth_2280 1.1e-56 oligopeptide/dipeptide ABC transporter ATPase K02031; Psort location: CytoplasmicMembrane, score: 8.78.
       0.491
GsiC_1
Putative oligopeptide ABC transporter, permease protein AppB; KEGG: bmd:BMD_1703 6.0e-51 nikB; nickel import ABC transporter permease subunit NikB K15585; Psort location: CytoplasmicMembrane, score: 10.00.
       0.481
GsiD_1
Putative oligopeptide ABC transporter, permease protein AppC; KEGG: bmd:BMD_1704 1.1e-44 nikC; nickel import ABC transporter permease subunit NikC K15586; Psort location: CytoplasmicMembrane, score: 10.00.
       0.481
KXB57277.1
Hypothetical protein.
       0.468
Your Current Organism:
Gemella haemolysans
NCBI taxonomy Id: 1379
Other names: ATCC 10379, CCUG 37985, CIP 101126, G. haemolysans, LMG 18984, LMG:18984, NCTC 12968, Neisseria haemolysans
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