STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AHX14909.1Transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. (442 aa)    
Predicted Functional Partners:
AHX14908.1
RND transporter; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
 0.955
AHX14907.1
Transporter; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
 
   0.923
AHX13339.1
Cation transporter; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
 0.624
AHX13445.1
Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.607
AHX14906.1
Glycosyl transferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.579
AHX12723.1
Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.556
AHX15018.1
Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.556
AHX15247.1
Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.556
AHX13428.1
Cation transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.543
AHX16306.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
 0.537
Your Current Organism:
Dyella jiangningensis
NCBI taxonomy Id: 1379159
Other names: CCTCC AB 2012160, D. jiangningensis, DSM 26119, Dyella jiangningensis Zhao et al. 2013, KACC 16539, strain SBZ3-12
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.