STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EQB62883.1Hypothetical protein; RBG1_1_462; RBG1_462. (318 aa)    
Predicted Functional Partners:
EQB64210.1
Hypothetical protein; RBG1_1_1789; RBG1_1789.
 
     0.787
EQB63015.1
Hypothetical protein; RBG1_1_594; RBG1_594.
 
     0.779
EQB64204.1
Hypothetical protein; RBG1_1_1783; RBG1_1783.
  
     0.775
EQB63002.1
Alpha amylase catalytic region; RBG1_1_581; RBG1_581.
  
     0.773
EQB63004.1
Coagulation factor protein; RBG1_1_583; RBG1_583.
  
     0.772
EQB63767.1
Propeptide peptidase M4 and M36; RBG1_1_1346; RBG1_1346.
  
     0.769
EQB63014.1
Hypothetical protein; RBG1_1_593; RBG1_593.
  
     0.764
EQB63012.1
Hypothetical protein; RBG1_1_591; RBG1_591.
  
     0.763
EQB63013.1
Hypothetical protein; RBG1_1_592; RBG1_592.
  
     0.763
EQB63837.1
Hypothetical protein; RBG1_1_1416; RBG1_1416.
  
     0.762
Your Current Organism:
candidate division Zixibacteria bacterium RBG1
NCBI taxonomy Id: 1379698
Other names: c. division Zixibacteria bacterium RBG-1, candidate division ZIXI bacterium RBG-1, candidate division Zixibacteria bacterium RBG-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.