STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
palHypothetical protein; RBG1_1_501; RBG1_501; Belongs to the Pal lipoprotein family. (175 aa)    
Predicted Functional Partners:
EQB62921.1
Hypothetical protein; RBG1_1_500; RBG1_500.
 
 0.957
EQB62761.1
WD40-like protein beta Propeller containing protein; RBG1_1_340; RBG1_340.
  
 
 0.942
EQB63866.1
WD40 protein; RBG1_1_1445; RBG1_1445.
  
 
 0.942
tolQ1
Protein TolQ1; RBG1_1_497; RBG1_497.
 
   
 0.864
EQB62919.1
Hypothetical protein; RBG1_1_498; RBG1_498.
 
 
 
 0.858
EQB62923.1
Hypothetical protein; RBG1_1_502; RBG1_502.
 
    0.829
EQB62920.1
Periplasmic protein TonB; RBG1_1_499; RBG1_499.
 
 
 
 0.773
guaB
Inosine-5'-monophosphate dehydrogenase; Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate-limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth. Belongs to the IMPDH/GMPR family.
    
 0.703
rlpA
Hypothetical protein; Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides.
  
 
 0.693
EQB62870.1
Hypothetical protein; RBG1_1_449; RBG1_449.
  
 
   0.687
Your Current Organism:
candidate division Zixibacteria bacterium RBG1
NCBI taxonomy Id: 1379698
Other names: c. division Zixibacteria bacterium RBG-1, candidate division ZIXI bacterium RBG-1, candidate division Zixibacteria bacterium RBG-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.