STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EQB63023.1ABC-2 type transport system protein; RBG1_1_602; RBG1_602. (272 aa)    
Predicted Functional Partners:
EQB63024.1
Antibiotic transport system ATP-binding protein; RBG1_1_603; RBG1_603.
 
 
 0.982
EQB63022.1
ABC-2 type transport system protein; RBG1_1_601; RBG1_601.
 
  
  0.964
EQB62845.1
ABC transporter related protein; RBG1_1_424; RBG1_424.
  
 
 0.696
EQB63044.1
ABC-type multidrug transport system, ATPase component; RBG1_1_623; RBG1_623.
  
 
 0.696
EQB63795.1
Hypothetical protein; RBG1_1_1374; RBG1_1374.
  
 
 0.696
EQB63718.1
Hypothetical protein; RBG1_1_1297; RBG1_1297.
    
 0.670
EQB63304.1
Hypothetical protein; RBG1_1_883; RBG1_883.
     
 0.661
EQB63303.1
Binding-protein-dependent transport system inner membrane component; RBG1_1_882; RBG1_882.
     
 0.655
EQB63021.1
Acetyltransferase, ribosomal protein N-acetylase; RBG1_1_600; RBG1_600.
 
     0.583
EQB63002.1
Alpha amylase catalytic region; RBG1_1_581; RBG1_581.
   
 
  0.470
Your Current Organism:
candidate division Zixibacteria bacterium RBG1
NCBI taxonomy Id: 1379698
Other names: c. division Zixibacteria bacterium RBG-1, candidate division ZIXI bacterium RBG-1, candidate division Zixibacteria bacterium RBG-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.