STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EQB63106.1Hypothetical protein; RBG1_1_685; RBG1_685. (213 aa)    
Predicted Functional Partners:
EQB62595.1
Thrombospondin; RBG1_1_174; RBG1_174.
  
 
  0.916
EQB63688.1
Hypothetical protein; RBG1_1_1267; RBG1_1267.
    
 0.912
EQB62902.1
FHA protein; RBG1_1_481; RBG1_481.
     
 0.909
EQB63689.1
Hypothetical protein; RBG1_1_1268; RBG1_1268.
    
 0.903
EQB63105.1
FAD/FMN-dependent dehydrogenase; RBG1_1_684; RBG1_684.
   
   0.795
EQB63107.1
Hypothetical protein; RBG1_1_686; RBG1_686.
       0.741
EQB63104.1
Ferredoxin subunit of nitrite reductase and ring-hydroxylating dioxygenase; RBG1_1_683; RBG1_683.
 
     0.679
manB
Phosphomannomutase; RBG1_1_687; RBG1_687.
       0.596
glmS
Glutamine-fructose-6-phosphate aminotransferase [isomerizing]; Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source.
       0.580
EQB63098.1
Hypothetical protein; RBG1_1_677; RBG1_677.
 
     0.485
Your Current Organism:
candidate division Zixibacteria bacterium RBG1
NCBI taxonomy Id: 1379698
Other names: c. division Zixibacteria bacterium RBG-1, candidate division ZIXI bacterium RBG-1, candidate division Zixibacteria bacterium RBG-1
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.