STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EQB63360.1Hypothetical protein; RBG1_1_939; RBG1_939. (62 aa)    
Predicted Functional Partners:
EQB63361.1
Hypothetical protein; RBG1_1_940; RBG1_940.
       0.513
EQB63362.1
16S rRNA methyltransferase B; Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA.
       0.513
EQB63363.1
Serine/threonine-protein kinase Sps; RBG1_1_942; RBG1_942.
       0.513
EQB63359.1
Hypothetical protein; RBG1_1_938; RBG1_938.
       0.503
rpeA
Ribulose-phosphate 3-epimerase; RBG1_1_943; RBG1_943; Belongs to the ribulose-phosphate 3-epimerase family.
       0.457
Your Current Organism:
candidate division Zixibacteria bacterium RBG1
NCBI taxonomy Id: 1379698
Other names: c. division Zixibacteria bacterium RBG-1, candidate division ZIXI bacterium RBG-1, candidate division Zixibacteria bacterium RBG-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.