STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EQB63530.1Hypothetical protein; RBG1_1_1109; RBG1_1109. (396 aa)    
Predicted Functional Partners:
EQB63529.1
Hypothetical protein; RBG1_1_1108; RBG1_1108; Belongs to the sigma-70 factor family.
  
    0.775
EQB63531.1
Hypothetical protein; RBG1_1_1110; RBG1_1110.
       0.757
EQB63532.1
Hypothetical protein; RBG1_1_1111; RBG1_1111.
       0.446
EQB63528.1
Nucleoside-diphosphate-sugar pyrophosphorylase; RBG1_1_1107; RBG1_1107.
       0.415
Your Current Organism:
candidate division Zixibacteria bacterium RBG1
NCBI taxonomy Id: 1379698
Other names: c. division Zixibacteria bacterium RBG-1, candidate division ZIXI bacterium RBG-1, candidate division Zixibacteria bacterium RBG-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.