STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EQB63708.1Hypothetical protein; RBG1_1_1287; RBG1_1287. (143 aa)    
Predicted Functional Partners:
EQB63707.1
Hypothetical protein; RBG1_1_1286; RBG1_1286.
       0.773
EQB63714.1
Cytochrome c oxidase, subunit III; RBG1_1_1293; RBG1_1293.
     
 0.701
coxA
Cytochrome c oxidase polypeptide I; Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1-3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B.
     
 0.701
EQB63720.1
Cytochrome c oxidase subunit 2; Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B).
     
 0.701
EQB63706.1
Hypothetical protein; RBG1_1_1285; RBG1_1285.
       0.682
EQB63709.1
Hypothetical protein; RBG1_1_1288; RBG1_1288.
       0.682
EQB63275.1
Pentaheme Cytochrome c; RBG1_1_854; RBG1_854.
   
 
  0.675
EQB63727.1
Alternative complex III, protein A; RBG1_1_1306; RBG1_1306.
   
 
  0.675
EQB62432.1
Hypothetical protein; RBG1_1_11; RBG1_11.
   
 
 0.666
EQB62431.1
Hypothetical protein; RBG1_1_10; RBG1_10; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.
   
 
  0.664
Your Current Organism:
candidate division Zixibacteria bacterium RBG1
NCBI taxonomy Id: 1379698
Other names: c. division Zixibacteria bacterium RBG-1, candidate division ZIXI bacterium RBG-1, candidate division Zixibacteria bacterium RBG-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.