STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EQB63784.1Outer membrane efflux protein; RBG1_1_1363; RBG1_1363. (436 aa)    
Predicted Functional Partners:
EQB64146.1
Cation/multidrug efflux pump; RBG1_1_1725; RBG1_1725; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
 0.992
EQB63785.1
Hypothetical protein; RBG1_1_1364; RBG1_1364; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 0.975
EQB62637.1
Macrolide-specific efflux protein maca; RBG1_1_216; RBG1_216; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 0.936
EQB64145.1
Hypothetical protein; RBG1_1_1724; RBG1_C00001G01724; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 0.928
EQB63787.1
ABC efflux pump, inner membrane subunit; RBG1_1_1366; RBG1_1366.
  
 0.920
EQB63786.1
ABC transporter related protein; RBG1_1_1365; RBG1_1365.
   
 0.915
EQB62596.1
Hypothetical protein; RBG1_1_175; RBG1_175.
 
 0.911
EQB64086.1
Secretion protein HlyD; RBG1_1_1665; RBG1_1665; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 0.910
EQB63043.1
Multidrug resistance efflux pump; RBG1_1_622; RBG1_622.
 
 0.907
czcB1
CzcB family heavy metal efflux protein; RBG1_1_1075; RBG1_1075; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
 0.905
Your Current Organism:
candidate division Zixibacteria bacterium RBG1
NCBI taxonomy Id: 1379698
Other names: c. division Zixibacteria bacterium RBG-1, candidate division ZIXI bacterium RBG-1, candidate division Zixibacteria bacterium RBG-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.