STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EQB63896.1Hypothetical protein; RBG1_1_1475; RBG1_1475. (554 aa)    
Predicted Functional Partners:
EQB63895.1
Cobalamin B12-binding protein; RBG1_1_1474; RBG1_1474.
 0.999
EQB63897.1
Lysine/arginine/ornithine transport system kinase; RBG1_1_1476; RBG1_1476.
 
 0.997
EQB63888.1
Hypothetical protein; RBG1_1_1467; RBG1_1467.
 
  
 0.927
EQB63892.1
Carboxyl transferase; RBG1_1_1471; RBG1_1471.
    
 0.863
EQB63894.1
Butyryl-CoA dehydrogenase; RBG1_1_1473; RBG1_1473.
    
 0.802
EQB63208.1
Fatty acid oxidation complex subunit alpha; RBG1_1_787; RBG1_787.
    
 0.799
EQB64320.1
Hypothetical protein; RBG1_1_1899; RBG1_1899.
    
 0.751
EQB63121.1
Acetyl-CoA hydrolase; RBG1_1_700; RBG1_C00001G00700.
    
 0.746
sucD
Succinyl-CoA synthetase, ADP-forming, alpha subunit; Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit.
    
 0.740
EQB63890.1
Biotin carboxyl carrier protein; RBG1_1_1469; RBG1_1469.
  
 
 0.736
Your Current Organism:
candidate division Zixibacteria bacterium RBG1
NCBI taxonomy Id: 1379698
Other names: c. division Zixibacteria bacterium RBG-1, candidate division ZIXI bacterium RBG-1, candidate division Zixibacteria bacterium RBG-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.