STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EQB64036.1Glycosyl transferase family protein; RBG1_1_1615; RBG1_1615. (494 aa)    
Predicted Functional Partners:
EQB63583.1
Polysaccharide deacetylase; RBG1_1_1162; RBG1_1162.
 
 0.920
EQB62807.1
Family 2 glycosyl transferase; RBG1_1_386; RBG1_386.
    
 0.774
EQB63418.1
Hypothetical protein; RBG1_1_997; RBG1_997.
    
 0.774
EQB62746.1
Diguanylate cyclase; RBG1_1_325; RBG1_325.
  
 
 0.730
EQB63647.1
Hypothetical protein; RBG1_1_1226; RBG1_1226.
  
 
 0.698
EQB63406.1
Hypothetical protein; RBG1_1_985; RBG1_985.
  
  
 0.676
EQB63377.1
Hypothetical protein; RBG1_1_956; RBG1_C00001G00956.
  
 0.674
EQB62701.1
Hypothetical protein; RBG1_1_280; RBG1_280.
  
 0.671
EQB63029.1
Serine/threonine protein kinase; RBG1_1_608; RBG1_608; overlaps another CDS with the same product name.
  
 0.665
EQB63774.1
TPR Domain containing protein; RBG1_1_1353; RBG1_1353.
  
 0.664
Your Current Organism:
candidate division Zixibacteria bacterium RBG1
NCBI taxonomy Id: 1379698
Other names: c. division Zixibacteria bacterium RBG-1, candidate division ZIXI bacterium RBG-1, candidate division Zixibacteria bacterium RBG-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.