STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EQB64167.1Hypothetical protein; RBG1_1_1746; RBG1_1746. (112 aa)    
Predicted Functional Partners:
EQB64166.1
Hypothetical protein; RBG1_1_1745; RBG1_1745.
 
 
 0.999
EQB64165.1
roadblock/LC7 family protein; RBG1_1_1744; RBG1_1744.
 
     0.791
EQB64168.1
Hypothetical protein; RBG1_1_1747; RBG1_1747.
       0.773
EQB64164.1
Hypothetical protein; RBG1_1_1743; RBG1_1743.
       0.757
EQB64169.1
TPR protein; RBG1_1_1748; RBG1_1748.
 
    
0.732
EQB64162.1
Type 4 fimbrial assembly protein pilC; RBG1_1_1741; RBG1_1741.
       0.460
EQB64163.1
Hypothetical protein; RBG1_1_1742; RBG1_1742.
       0.460
EQB64170.1
Hypothetical protein; RBG1_1_1749; RBG1_1749.
       0.443
EQB64171.1
Hypothetical protein; RBG1_1_1750; RBG1_1750.
       0.443
EQB64172.1
ComEC; RBG1_1_1751; RBG1_1751.
       0.443
Your Current Organism:
candidate division Zixibacteria bacterium RBG1
NCBI taxonomy Id: 1379698
Other names: c. division Zixibacteria bacterium RBG-1, candidate division ZIXI bacterium RBG-1, candidate division Zixibacteria bacterium RBG-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.