STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ATO8_01725Cysteine desulfurase; Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L-selenocystine to produce L-alanine. (406 aa)    
Predicted Functional Partners:
ATO8_00115
Cysteine desulfuration protein SufE.
 0.998
ATO8_04706
Uncharacterized protein.
 
 0.993
ATO8_01745
FeS assembly ATPase SufC.
 
  
 0.985
ATO8_01740
Protein SufD.
 
 
 0.982
ATO8_01765
Cysteine desulfurase activator complex subunit SufB.
 
 
 0.977
ATO8_01770
Cysteine desulfurase.
    
 0.820
ATO8_01730
Uncharacterized protein.
  
    0.801
ATO8_01735
Uncharacterized protein.
       0.800
ATO8_04956
Selenide,water dikinase.
   
 0.796
gcvP
Glycine dehydrogenase (decarboxylating); The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; Belongs to the GcvP family.
    
  0.792
Your Current Organism:
Roseivivax marinus
NCBI taxonomy Id: 1379903
Other names: DSM 27511, JCM 19386, KCTC 32470, LMG 27156 [[Roseivivax atlanticus]], LMG:27156 [[Roseivivax atlanticus]], MCCC 1A09150 [[Roseivivax atlanticus]], R. marinus, Roseivivax atlanticus, Roseivivax atlanticus Li et al. 2015, Roseivivax marinus Dai et al. 2014, Roseivivax sp. 22II-s10s, Roseivivax sp. ZL136, strain 22II-s10s [[Roseivivax atlanticus]], strain ZL136
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