STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ATO8_04181ABC transporter permease. (292 aa)    
Predicted Functional Partners:
ATO8_04171
ABC transporter substrate-binding protein.
 
 
 0.993
ATO8_04176
Binding-protein-dependent transport system inner membrane protein.
 
 0.986
ATO8_04166
ABC transporter-like protein; Belongs to the ABC transporter superfamily.
 
 
  0.968
ATO8_03726
Binding-protein-dependent transport system inner membrane protein.
 
 0.910
ATO8_10628
Spermidine/putrescine ABC transporter permease.
 
 0.894
ATO8_04186
Hydantoin racemase.
 
     0.890
ATO8_03716
Putrescine-binding periplasmic protein; Required for the activity of the bacterial periplasmic transport system of putrescine; Belongs to the bacterial solute-binding protein PotD/PotF family.
 
 0.878
ATO8_16990
ABC transporter, periplasmic spermidine putrescine-binding protein PotD.
 
 
 0.877
ATO8_12491
Uncharacterized protein.
  
 
  0.875
ATO8_12501
Binding-protein-dependent transport system inner membrane protein.
 
 
 0.870
Your Current Organism:
Roseivivax marinus
NCBI taxonomy Id: 1379903
Other names: DSM 27511, JCM 19386, KCTC 32470, LMG 27156 [[Roseivivax atlanticus]], LMG:27156 [[Roseivivax atlanticus]], MCCC 1A09150 [[Roseivivax atlanticus]], R. marinus, Roseivivax atlanticus, Roseivivax atlanticus Li et al. 2015, Roseivivax marinus Dai et al. 2014, Roseivivax sp. 22II-s10s, Roseivivax sp. ZL136, strain 22II-s10s [[Roseivivax atlanticus]], strain ZL136
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.