STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ATO8_04921VOC domain-containing protein. (131 aa)    
Predicted Functional Partners:
gloB
Hydroxyacylglutathione hydrolase; Thiolesterase that catalyzes the hydrolysis of S-D-lactoyl- glutathione to form glutathione and D-lactic acid.
    
 0.902
ATO8_04926
Uncharacterized protein.
 
     0.873
ATO8_04916
RHH_4 domain-containing protein.
 
     0.841
ATO8_04931
GMC oxidoreductase.
 
    0.825
ATO8_05841
Methylmalonyl-CoA mutase large subunit.
    
 0.803
ATO8_07926
Methylmalonyl-CoA mutase.
    
 0.803
nuoI
NADH-quinone oxidoreductase subunit I; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient.
  
 
 0.798
trpB
Tryptophan synthase beta chain; The beta subunit is responsible for the synthesis of L- tryptophan from indole and L-serine.
   
  0.789
ATO8_05141
Amine oxidase.
  
  
  0.783
ATO8_05196
Uncharacterized protein.
   
    0.772
Your Current Organism:
Roseivivax marinus
NCBI taxonomy Id: 1379903
Other names: DSM 27511, JCM 19386, KCTC 32470, LMG 27156 [[Roseivivax atlanticus]], LMG:27156 [[Roseivivax atlanticus]], MCCC 1A09150 [[Roseivivax atlanticus]], R. marinus, Roseivivax atlanticus, Roseivivax atlanticus Li et al. 2015, Roseivivax marinus Dai et al. 2014, Roseivivax sp. 22II-s10s, Roseivivax sp. ZL136, strain 22II-s10s [[Roseivivax atlanticus]], strain ZL136
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