STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ATO8_10563Uncharacterized protein. (153 aa)    
Predicted Functional Partners:
ATO8_10558
Carbonic anhydrase; Reversible hydration of carbon dioxide. Belongs to the beta-class carbonic anhydrase family.
       0.689
ATO8_16108
Uncharacterized protein.
  
     0.639
ATO8_02030
XRE family transcriptional regulator.
  
     0.632
ATO8_10568
Leucyl aminopeptidase; Belongs to the peptidase M17 family.
       0.619
ATO8_10573
NlpC/P60 domain-containing protein.
       0.619
ATO8_11479
Uncharacterized protein.
  
     0.600
ATO8_13307
FlgN-like protein.
  
     0.569
ATO8_16208
Uncharacterized protein.
  
     0.565
ATO8_04821
N-acetyltransferase GCN5.
  
     0.553
ATO8_03771
Uncharacterized protein.
  
     0.547
Your Current Organism:
Roseivivax marinus
NCBI taxonomy Id: 1379903
Other names: DSM 27511, JCM 19386, KCTC 32470, LMG 27156 [[Roseivivax atlanticus]], LMG:27156 [[Roseivivax atlanticus]], MCCC 1A09150 [[Roseivivax atlanticus]], R. marinus, Roseivivax atlanticus, Roseivivax atlanticus Li et al. 2015, Roseivivax marinus Dai et al. 2014, Roseivivax sp. 22II-s10s, Roseivivax sp. ZL136, strain 22II-s10s [[Roseivivax atlanticus]], strain ZL136
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.