STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ATO8_19259Uncharacterized protein. (507 aa)    
Predicted Functional Partners:
ATO8_19264
Glycosyl transferase family protein.
    
0.768
ATO8_19249
Uncharacterized protein.
     0.596
ATO8_19269
Phosphoglycolate phosphatase.
       0.553
ATO8_19254
Uncharacterized protein.
       0.532
ATO8_02740
Family 2 glycosyl transferase.
 
    0.426
ATO8_09323
Transport permease protein.
 
     0.409
Your Current Organism:
Roseivivax marinus
NCBI taxonomy Id: 1379903
Other names: DSM 27511, JCM 19386, KCTC 32470, LMG 27156 [[Roseivivax atlanticus]], LMG:27156 [[Roseivivax atlanticus]], MCCC 1A09150 [[Roseivivax atlanticus]], R. marinus, Roseivivax atlanticus, Roseivivax atlanticus Li et al. 2015, Roseivivax marinus Dai et al. 2014, Roseivivax sp. 22II-s10s, Roseivivax sp. ZL136, strain 22II-s10s [[Roseivivax atlanticus]], strain ZL136
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.