STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000701325_07044Unannotated protein. (284 aa)    
Predicted Functional Partners:
GCA_000701325_03798
Unannotated protein.
 
 0.985
GCA_000701325_03800
Unannotated protein.
 
 
 0.897
GCA_000701325_03797
Unannotated protein.
  
 0.828
GCA_000701325_03801
Unannotated protein.
 
  
  0.794
GCA_000701325_07045
Unannotated protein.
       0.785
GCA_000701325_07046
Unannotated protein.
     
 0.760
GCA_000701325_02682
Unannotated protein.
 
 0.757
GCA_000701325_07047
Unannotated protein.
       0.733
GCA_000701325_00104
Unannotated protein.
    
  0.708
GCA_000701325_01220
Unannotated protein.
    
  0.708
Your Current Organism:
Streptomyces sp. URHA0041
NCBI taxonomy Id: 1380346
Other names: S. sp. URHA0041
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.