STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000702465_01910Unannotated protein. (412 aa)    
Predicted Functional Partners:
GCA_000702465_01909
Unannotated protein.
 
     0.946
GCA_000702465_03992
Unannotated protein.
  
 
 0.837
GCA_000702465_01908
Unannotated protein.
       0.773
GCA_000702465_03990
Unannotated protein.
     
 0.724
GCA_000702465_01907
Unannotated protein.
       0.689
GCA_000702465_01911
Unannotated protein.
       0.601
GCA_000702465_02454
Unannotated protein.
     
 0.533
GCA_000702465_01913
Unannotated protein.
 
     0.530
GCA_000702465_01912
Unannotated protein.
   
   0.512
GCA_000702465_04014
Unannotated protein.
    
 0.502
Your Current Organism:
Geodermatophilaceae bacterium URHB0048
NCBI taxonomy Id: 1380347
Other names: G. bacterium URHB0048
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.